STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC88CCoiled-coil domain containing 88C. (2023 aa)    
Predicted Functional Partners:
NUDT2
Nudix hydrolase 2; Belongs to the Nudix hydrolase family.
      
 0.671
KCNF1
Potassium voltage-gated channel modifier subfamily F member 1; Belongs to the potassium channel family.
    
 
 0.637
NOL10
Nucleolar protein 10.
      
 0.635
TRIM46
Tripartite motif containing 46.
      
 0.627
STRN3
Striatin 3.
      
 0.597
PPP6R3
Protein phosphatase 6 regulatory subunit 3.
    
 
 0.572
TCL1B
T cell leukemia/lymphoma 1B.
      
 0.546
DVL1
Dishevelled segment polarity protein 1.
    
 0.533
HM13
Histocompatibility minor 13.
      
 0.526
ARVCF
ARVCF delta catenin family member.
    
 
 0.524
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
Server load: low (26%) [HD]