STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPHX4Epoxide hydrolase 4. (362 aa)    
Predicted Functional Partners:
EPHX1
Epoxide hydrolase 1.
   
  
 0.642
CACNA1I
Voltage-dependent T-type calcium channel subunit alpha; Voltage-sensitive calcium channels (VSCC) mediate the entry of calcium ions into excitable cells and are also involved in a variety of calcium-dependent processes, including muscle contraction, hormone or neurotransmitter release, gene expression, cell motility, cell division and cell death. This channel gives rise to T-type calcium currents. T-type calcium channels belong to the "low-voltage activated (LVA)" group and are strongly blocked by nickel and mibefradil. A particularity of this type of channels is an opening at quite ne [...]
   
  
 0.622
TVP23A
Golgi apparatus membrane protein TVP23 homolog.
      
 0.618
COP1
COP1 E3 ubiquitin ligase.
      
 0.616
LOC101088802
Uncharacterized protein.
   
 
 0.557
GSC
Goosecoid homeobox.
    
 
 0.550
FBXL17
F-box and leucine rich repeat protein 17.
      
 0.549
OCIAD2
OCIA domain containing 2.
      
 0.529
OLFM2
Olfactomedin 2.
   
  
 0.501
MANSC1
MANSC domain containing 1.
    
 
 0.499
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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