Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TRIM42Tripartite motif containing 42. (724 aa)    
Predicted Functional Partners:
CCIN
Calicin.
   
   0.755
CREB5
cAMP responsive element binding protein 5.
    
   0.630
YWHAQ
Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta; Belongs to the 14-3-3 family.
    
  0.628
TRIM69
Tripartite motif containing 69.
   
 
 0.610
TRIM23
Tripartite motif containing 23.
    
 0.610
TRIM41
Tripartite motif containing 41.
    
 
 0.572
FSD2
Fibronectin type III and SPRY domain containing 2.
      
 0.567
TRIM47
Tripartite motif containing 47.
    
 
 0.540
IGBP1
Uncharacterized protein.
    
 
 0.537
M3X4G7_FELCA
Uncharacterized protein.
    
 
 0.537
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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