STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIM42Tripartite motif containing 42. (724 aa)    
Predicted Functional Partners:
TRIM47
Tripartite motif containing 47.
      
 0.770
TRIM69
Tripartite motif containing 69.
      
 0.749
TRIM66
Tripartite motif containing 66.
      
 0.728
TRIM41
Tripartite motif containing 41.
      
 0.719
TRIM4
Tripartite motif containing 4.
      
 0.703
TRIM23
Tripartite motif containing 23.
    
 0.702
TRIM65
Tripartite motif containing 65.
      
 0.701
C10orf120
Chromosome 10 open reading frame 120.
   
  
 0.638
SPRED3
Sprouty related EVH1 domain containing 3.
      
 0.637
SAXO1
Stabilizer of axonemal microtubules 1.
   
 0.630
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.