STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARHGEF15Rho guanine nucleotide exchange factor 15. (843 aa)    
Predicted Functional Partners:
ECT2L
Epithelial cell transforming 2 like.
     
 0.831
FGD5
FYVE, RhoGEF and PH domain containing 5.
   
  
 0.698
LRRC58
Leucine rich repeat containing 58.
      
 0.510
MASP1
Mannan binding lectin serine peptidase 1; Belongs to the peptidase S1 family.
      
 0.506
BEND6
BEN domain containing 6.
      
 0.487
FBXL12
F-box and leucine rich repeat protein 12.
      
 0.479
PLEKHG4
Pleckstrin homology and RhoGEF domain containing G4.
   
 
 0.473
BAIAP2
BAI1 associated protein 2.
   
  
 0.466
RHOA
Ras homolog family member A.
    
 0.465
CASKIN2
CASK interacting protein 2.
      
 0.455
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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