Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CINPCyclin dependent kinase 2 interacting protein. (212 aa)    
Predicted Functional Partners:
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
   
 0.974
CC1H1orf109
Chromosome C1 C1orf109 homolog.
    
 
 0.937
PAF1
PAF1 homolog, Paf1/RNA polymerase II complex component.
   
 0.899
CDC73
Cell division cycle 73.
   
 0.885
SSRP1
Tankyrase 1 binding protein 1.
   
 0.869
SUPT16H
SPT16 homolog, facilitates chromatin remodeling subunit.
   
 0.855
RTF1
RTF1 homolog, Paf1/RNA polymerase II complex component.
   
 0.852
SUPT6H
Transcription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII). Belongs to the SPT6 family.
   
 0.836
SPATA5L1
Spermatogenesis associated 5 like 1.
   
 0.817
IWS1
Interacts with SUPT6H, CTD assembly factor 1.
   
 0.803
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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