STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TDRD5Tudor domain containing 5. (1034 aa)    
Predicted Functional Partners:
VPS53
VPS53 subunit of GARP complex.
      
 0.845
SYT10
Synaptotagmin 10.
      
 0.845
AFAP1L1
Actin filament associated protein 1 like 1.
      
 0.838
PNLDC1
PARN like, ribonuclease domain containing 1.
      
 0.802
EXD1
Exonuclease 3'-5' domain containing 1.
   
  
 0.761
RPH3AL
Rabphilin 3A like (without C2 domains).
   
  
 0.750
PIWIL2
Piwi like RNA-mediated gene silencing 2; Belongs to the argonaute family.
   
 0.726
GEMIN4
Gem nuclear organelle associated protein 4.
      
 0.704
TDRD9
Tudor domain containing 9.
   
 0.701
CNTN6
Contactin 6.
      
 0.687
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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