Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DCP2Decapping mRNA 2. (422 aa)    
Predicted Functional Partners:
DCP1A
Decapping mRNA 1A.
    
 0.998
EDC4
Enhancer of mRNA decapping 4.
    
 0.998
EDC3
Enhancer of mRNA decapping 3.
  
 0.998
XRN1
5'-3' exoribonuclease 1.
   
 0.997
DDX6
DEAD-box helicase 6; Belongs to the DEAD box helicase family.
   
 0.996
DCP1B
Decapping mRNA 1B.
    
 0.995
LSM4
U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.
   
 0.977
CNOT7
CCR4-NOT transcription complex subunit 7.
    
 
 0.953
PATL1
PAT1 homolog 1, processing body mRNA decay factor.
    
 0.948
LSM1
U6 snRNA-associated Sm-like protein LSm1; Plays a role in the degradation of histone mRNAs, the only eukaryotic mRNAs that are not polyadenylated. Probably also part of an LSm subunits-containing complex involved in the general process of mRNA degradation.
    
 0.943
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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