Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCNFCyclin F; Belongs to the cyclin family. (848 aa)    
Predicted Functional Partners:
CUL1
Cullin 1; Belongs to the cullin family.
    
 0.976
CCP110
Centriolar coiled-coil protein 110.
    
 
 0.965
RBX1
Ring-box 1.
    
 0.935
CDC6
Cell division control protein; Involved in the initiation of DNA replication. Also participates in checkpoint controls that ensure DNA replication is completed before mitosis is initiated; Belongs to the CDC6/cdc18 family.
   
 0.933
ENSFCAP00000055272
Uncharacterized protein; Belongs to the SKP1 family.
    
 0.900
SKP1
Uncharacterized protein; Belongs to the SKP1 family.
    
 0.900
NUSAP1
Nucleolar and spindle associated protein 1.
   
 
 0.865
VCP
Valosin containing protein; Belongs to the AAA ATPase family.
    
 
 0.861
SQSTM1
Sequestosome 1.
    
 
 0.841
CDC20
Cell division cycle 20.
   
 0.839
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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