STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DTX3Deltex E3 ubiquitin ligase 3. (352 aa)    
Predicted Functional Partners:
NOTCH1
Notch receptor 1.
    
 0.749
ENSFCAP00000057780
Uncharacterized protein.
    
 0.714
NOTCH3
Notch receptor 3.
    
 0.711
VGLL1
Uncharacterized protein.
      
 0.704
NOTCH2
Notch receptor 2.
    
 0.686
LFNG
LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase.
      
 0.635
PYGO1
Pygopus family PHD finger 1.
    
 0.629
DCAF13
DDB1 and CUL4 associated factor 13.
    
 
 0.596
SLC26A5
Prestin; Motor protein that converts auditory stimuli to length changes in outer hair cells and mediates sound amplification in the mammalian hearing organ; Belongs to the SLC26A/SulP transporter (TC 2.A.53) family.
      
 0.544
TRIB2
Tribbles pseudokinase 2.
    
 
 0.513
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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