Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
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[Homology]
Score
URB1URB1 ribosome biogenesis homolog. (2269 aa)    
Predicted Functional Partners:
HEATR1
HEAT repeat containing 1.
   
 
 0.962
PDCD11
Programmed cell death 11.
   
 
 0.948
NOL8
Nucleolar protein 8.
   
 
 0.928
CEBPZ
CCAAT enhancer binding protein zeta.
   
 
 0.921
DDX24
DEAD-box helicase 24.
   
 
 0.885
UTP20
UTP20 small subunit processome component.
   
  
 0.883
POLR1B
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
  
 0.877
NOC2L
NOC2 like nucleolar associated transcriptional repressor.
   
 
 0.874
PRRT4
Proline rich transmembrane protein 4.
   
 
 0.856
URB2
URB2 ribosome biogenesis homolog.
   
  
 0.854
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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