STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GALNT18Polypeptide N-acetylgalactosaminyltransferase. (607 aa)    
Predicted Functional Partners:
ST6GALNAC1
ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 1; Belongs to the glycosyltransferase 29 family.
     
 0.915
B3GNT6
Hexosyltransferase.
     
 0.904
OSBPL6
Oxysterol-binding protein; Belongs to the OSBP family.
      
 0.885
TNRC18
Trinucleotide repeat containing 18.
   
  
 0.881
DNPEP
Aspartyl aminopeptidase; Belongs to the peptidase M18 family.
      
 0.862
NCAPH2
Non-SMC condensin II complex subunit H2.
      
 0.801
C1GALT1C1
C1GALT1 specific chaperone 1.
     
 0.774
SEZ6L
Seizure related 6 homolog like.
   
 0.768
C1GALT1
Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1; Glycosyltransferase that generates the core 1 O-glycan Gal- beta1-3GalNAc-alpha1-Ser/Thr (T antigen), which is a precursor for many extended O-glycans in glycoproteins; Belongs to the glycosyltransferase 31 family. Beta3-Gal-T subfamily.
   
 
 0.707
CFAP54
Cilia and flagella associated protein 54.
      
 0.697
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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