STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VILLVillin like. (855 aa)    
Predicted Functional Partners:
DPPA4
Developmental pluripotency associated 4.
      
 0.766
CHPT1
Choline phosphotransferase 1.
      
 0.766
AKAP12
A-kinase anchoring protein 12.
      
 0.660
COBL
Cordon-bleu WH2 repeat protein.
      
 0.604
RAB27B
RAB27B, member RAS oncogene family.
      
 0.587
COG8
Conserved oligomeric Golgi complex subunit 8; Belongs to the COG8 family.
    
 
 0.524
RUFY4
RUN and FYVE domain containing 4.
    
 
 0.513
COG6
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
    
 
 0.493
CASK
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
   
  0.473
COG3
Component of oligomeric golgi complex 3.
    
 
 0.472
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.