STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WDR45BWD repeat domain 45B. (344 aa)    
Predicted Functional Partners:
RAB40B
RAB40B, member RAS oncogene family.
 
 
  
 0.814
CE2H16orf70
Chromosome E2 C16orf70 homolog.
   
  
 0.773
BCAS3
BCAS3 microtubule associated cell migration factor.
   
  
 0.758
WIPI1
WD repeat domain, phosphoinositide interacting 1.
   
0.733
RAB40C
RAB40C, member RAS oncogene family.
 
 
  
 0.729
ZFYVE1
Zinc finger FYVE-type containing 1.
    
 
 0.677
PEX1
Peroxisomal biogenesis factor 1.
    
 
 0.668
SGSM2
Small G protein signaling modulator 2.
      
 0.628
ATG2A
Autophagy related 2A.
    
 
 0.574
ATG2B
Autophagy related 2B.
    
 
 0.540
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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