STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANKRD27Ankyrin repeat domain 27. (1050 aa)    
Predicted Functional Partners:
VPS29
Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.
    
 
 0.986
VAMP7
Vesicle associated membrane protein 7; Belongs to the synaptobrevin family.
    
 0.858
RABEP2
Rabaptin, RAB GTPase binding effector protein 2.
   
 0.760
RABEP1
Rabaptin, RAB GTPase binding effector protein 1.
   
 0.760
RAB21
RAB21, member RAS oncogene family.
   
 0.757
AP3D1
Adaptor related protein complex 3 subunit delta 1.
    
 0.732
RAB38
RAB38, member RAS oncogene family.
    
 
 0.726
GOSR2
Uncharacterized protein; Belongs to the glycosyl hydrolase 22 family.
    
 0.717
CSNK2A2
Casein kinase 2 alpha 2; Belongs to the protein kinase superfamily.
    
 
 0.673
AKAP7
A-kinase anchoring protein 7.
    
 
 0.666
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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