Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PDCD11Programmed cell death 11. (1871 aa)    
Predicted Functional Partners:
UTP20
UTP20 small subunit processome component.
   
 0.998
NOP14
NOP14 nucleolar protein.
   
 0.997
UTP14A
Uncharacterized protein.
   
 0.996
KRR1
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 0.995
DDX52
DExD-box helicase 52.
   
 0.993
HEATR1
HEAT repeat containing 1.
   
 0.993
RPS9
Ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family.
  
 0.992
NOL6
Nucleolar protein 6.
   
 0.991
UTP4
UTP4 small subunit processome component.
   
 0.991
DCAF13
DDB1 and CUL4 associated factor 13.
   
 0.991
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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