IGF2BP1 protein (Felis catus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

IGF2BP1

Insulin like growth factor 2 mRNA binding protein 1. (577 aa)

Predicted Functional Partners:

RPH3AL

0.749

METTL16

0.671

YTHDF1

0.656

IGF2

0.655

YTHDC2

0.632

CBLL1

0.622

OPRD1

0.617

SYNCRIP

0.605

MPHOSPH6

0.602

ENSFCAP00000027050

0.602

Your Current Organism:

Felis catus

NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CBLL1	IGF2BP1	ENSFCAP00000050683	ENSFCAP00000002259	Cbl proto-oncogene like 1.	Insulin like growth factor 2 mRNA binding protein 1.	0.622
CBLL1	METTL16	ENSFCAP00000050683	ENSFCAP00000005869	Cbl proto-oncogene like 1.	U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase; RNA N6-methyltransferase that methylates adenosine residues of a subset of RNAs and plays a key role in S-adenosyl-L-methionine homeostasis by regulating expression of MAT2A transcripts. Able to N6- methylate a subset of mRNAs and U6 small nuclear RNAs (U6 snRNAs). In contrast to the METTL3-METTL14 heterodimer, only able to methylate a limited number of RNAs: requires both a 5'UACAGAGAA-3' nonamer sequence and a specific RNA structure. In presence of S-adenosyl-L-methionine, binds the 3'-UTR region of MAT2A mRNA and specifical [...]	0.549
CBLL1	OPRD1	ENSFCAP00000050683	ENSFCAP00000052132	Cbl proto-oncogene like 1.	YTH N6-methyladenosine RNA binding protein 2.	0.459
CBLL1	YTHDC2	ENSFCAP00000050683	ENSFCAP00000018534	Cbl proto-oncogene like 1.	YTH domain containing 2.	0.501
CBLL1	YTHDF1	ENSFCAP00000050683	ENSFCAP00000056859	Cbl proto-oncogene like 1.	YTH N6-methyladenosine RNA binding protein 1.	0.494
ENSFCAP00000027050	IGF2BP1	ENSFCAP00000027050	ENSFCAP00000002259	Uncharacterized protein.	Insulin like growth factor 2 mRNA binding protein 1.	0.602
ENSFCAP00000027050	RPH3AL	ENSFCAP00000027050	ENSFCAP00000007368	Uncharacterized protein.	Rabphilin 3A like (without C2 domains).	0.655
IGF2	IGF2BP1	ENSFCAP00000033832	ENSFCAP00000002259	Insulin like growth factor 2.	Insulin like growth factor 2 mRNA binding protein 1.	0.655
IGF2BP1	CBLL1	ENSFCAP00000002259	ENSFCAP00000050683	Insulin like growth factor 2 mRNA binding protein 1.	Cbl proto-oncogene like 1.	0.622
IGF2BP1	ENSFCAP00000027050	ENSFCAP00000002259	ENSFCAP00000027050	Insulin like growth factor 2 mRNA binding protein 1.	Uncharacterized protein.	0.602
IGF2BP1	IGF2	ENSFCAP00000002259	ENSFCAP00000033832	Insulin like growth factor 2 mRNA binding protein 1.	Insulin like growth factor 2.	0.655
IGF2BP1	METTL16	ENSFCAP00000002259	ENSFCAP00000005869	Insulin like growth factor 2 mRNA binding protein 1.	U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase; RNA N6-methyltransferase that methylates adenosine residues of a subset of RNAs and plays a key role in S-adenosyl-L-methionine homeostasis by regulating expression of MAT2A transcripts. Able to N6- methylate a subset of mRNAs and U6 small nuclear RNAs (U6 snRNAs). In contrast to the METTL3-METTL14 heterodimer, only able to methylate a limited number of RNAs: requires both a 5'UACAGAGAA-3' nonamer sequence and a specific RNA structure. In presence of S-adenosyl-L-methionine, binds the 3'-UTR region of MAT2A mRNA and specifical [...]	0.671
IGF2BP1	MPHOSPH6	ENSFCAP00000002259	ENSFCAP00000016529	Insulin like growth factor 2 mRNA binding protein 1.	M-phase phosphoprotein 6.	0.602
IGF2BP1	OPRD1	ENSFCAP00000002259	ENSFCAP00000052132	Insulin like growth factor 2 mRNA binding protein 1.	YTH N6-methyladenosine RNA binding protein 2.	0.617
IGF2BP1	RPH3AL	ENSFCAP00000002259	ENSFCAP00000007368	Insulin like growth factor 2 mRNA binding protein 1.	Rabphilin 3A like (without C2 domains).	0.749
IGF2BP1	SYNCRIP	ENSFCAP00000002259	ENSFCAP00000020089	Insulin like growth factor 2 mRNA binding protein 1.	Synaptotagmin binding cytoplasmic RNA interacting protein.	0.605
IGF2BP1	YTHDC2	ENSFCAP00000002259	ENSFCAP00000018534	Insulin like growth factor 2 mRNA binding protein 1.	YTH domain containing 2.	0.632
IGF2BP1	YTHDF1	ENSFCAP00000002259	ENSFCAP00000056859	Insulin like growth factor 2 mRNA binding protein 1.	YTH N6-methyladenosine RNA binding protein 1.	0.656
METTL16	CBLL1	ENSFCAP00000005869	ENSFCAP00000050683	U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase; RNA N6-methyltransferase that methylates adenosine residues of a subset of RNAs and plays a key role in S-adenosyl-L-methionine homeostasis by regulating expression of MAT2A transcripts. Able to N6- methylate a subset of mRNAs and U6 small nuclear RNAs (U6 snRNAs). In contrast to the METTL3-METTL14 heterodimer, only able to methylate a limited number of RNAs: requires both a 5'UACAGAGAA-3' nonamer sequence and a specific RNA structure. In presence of S-adenosyl-L-methionine, binds the 3'-UTR region of MAT2A mRNA and specifical [...]	Cbl proto-oncogene like 1.	0.549
METTL16	IGF2BP1	ENSFCAP00000005869	ENSFCAP00000002259	U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase; RNA N6-methyltransferase that methylates adenosine residues of a subset of RNAs and plays a key role in S-adenosyl-L-methionine homeostasis by regulating expression of MAT2A transcripts. Able to N6- methylate a subset of mRNAs and U6 small nuclear RNAs (U6 snRNAs). In contrast to the METTL3-METTL14 heterodimer, only able to methylate a limited number of RNAs: requires both a 5'UACAGAGAA-3' nonamer sequence and a specific RNA structure. In presence of S-adenosyl-L-methionine, binds the 3'-UTR region of MAT2A mRNA and specifical [...]	Insulin like growth factor 2 mRNA binding protein 1.	0.671