STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PNLDC1PARN like, ribonuclease domain containing 1. (531 aa)    
Predicted Functional Partners:
TDRKH
Tudor and KH domain containing.
      
 0.921
PARN
Poly(A)-specific ribonuclease.
  
  
0.917
TDRD5
Tudor domain containing 5.
      
 0.802
PLD6
Phospholipase D family member 6.
      
 0.793
DCP2
Decapping mRNA 2.
     
 0.773
HENMT1
HEN methyltransferase 1.
      
 0.642
MOV10L1
Mov10 like RISC complex RNA helicase 1.
      
 0.606
MOV10
Mov10 RISC complex RNA helicase.
      
 0.606
ENSFCAP00000058607
AAA_12 domain-containing protein.
      
 0.606
PTDSS2
Phosphatidylserine synthase 2.
   
  
 0.584
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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