STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIM41Tripartite motif containing 41. (645 aa)    
Predicted Functional Partners:
TRIM66
Tripartite motif containing 66.
      
 0.866
TRIM44
Tripartite motif containing 44.
    
 
 0.750
TRIM42
Tripartite motif containing 42.
      
 0.719
TRIM23
Tripartite motif containing 23.
    
 0.713
ZNF692
Zinc finger protein 692.
   
 0.623
TRIM32
Uncharacterized protein.
    
 0.607
TRIM54
Tripartite motif containing 54.
      
 0.576
SPG7
SPG7 matrix AAA peptidase subunit, paraplegin.
   
    0.573
TRIM56
Tripartite motif containing 56.
    
 
 0.540
PRR7
Proline rich 7, synaptic.
      
 0.512
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.