STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC9C1Solute carrier family 9 member C1. (1178 aa)    
Predicted Functional Partners:
CPLANE1
Ciliogenesis and planar polarity effector 1.
      
 0.671
SCAPER
S-phase cyclin A associated protein in the ER.
      
 0.666
FSIP2
Fibrous sheath interacting protein 2.
   
  
 0.552
PSMA4
Proteasome subunit alpha type.
      
 0.549
SLC9A9
Sodium/hydrogen exchanger; Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family.
      
 0.545
EFCAB9
EF-hand calcium binding domain 9.
   
 0.533
SPEF2
Sperm flagellar 2.
   
 0.528
LOC101090350
Uncharacterized protein.
   
 0.494
NXN
Nucleoredoxin.
      
 0.491
CATSPERB
Cation channel sperm associated auxiliary subunit beta.
      
 0.489
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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