STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LMNB1Lamin B1; Belongs to the intermediate filament family. (586 aa)    
Predicted Functional Partners:
LMNA
Lamin A/C; Belongs to the intermediate filament family.
    
0.994
CASP6
Caspase 6; Belongs to the phospholipase A2 family.
   
 0.989
EMD
Emerin.
    
 0.980
LMNB2
Lamin B2; Belongs to the intermediate filament family.
     
0.943
BANF1
Barrier to autointegration factor 1.
   
 0.916
GZMB
Granzyme B; Belongs to the peptidase S1 family.
    
 0.902
LOC101099215
Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.
    
 0.902
SUN2
Sad1 and UNC84 domain containing 2.
    
 0.891
SYNE1
Spectrin repeat containing nuclear envelope protein 1.
    
 0.823
BANF2
Barrier to autointegration factor 2.
   
 0.820
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.