STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TBC1D20TBC1 domain family member 20. (403 aa)    
Predicted Functional Partners:
RAB1B
RAB1B, member RAS oncogene family.
    
 0.851
RAB1A
RAB1A, member RAS oncogene family.
    
 0.851
RAB3GAP1
RAB3 GTPase activating protein catalytic subunit 1.
      
 0.770
TBC1D7
TBC1 domain family member 7.
      
 0.758
DENND1B
DENN domain containing 1B.
      
 0.748
RAB33B
Uncharacterized protein.
    
 0.743
RAB3GAP2
RAB3 GTPase activating non-catalytic protein subunit 2.
      
 0.736
RAB33A
RAB33A, member RAS oncogene family.
    
 0.735
RAB19
RAB19, member RAS oncogene family.
    
 0.735
RAB43
RAB43, member RAS oncogene family.
    
 0.735
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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