STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSPAN6Tetraspanin. (245 aa)    
Predicted Functional Partners:
SH2D7
SH2 domain containing 7.
      
 0.720
FRMPD4
FERM and PDZ domain containing 4.
      
 0.676
RAB14
RAB14, member RAS oncogene family.
    
 0.652
PICK1
Protein interacting with PRKCA 1.
     
 0.650
SEZ6L2
Seizure related 6 homolog like 2.
   
  
 0.639
TMEM45B
Transmembrane protein 45B.
      
 0.576
TSPAN31
Tetraspanin 31; Belongs to the tetraspanin (TM4SF) family.
   
  
 0.567
MAGED2
MAGE family member D2.
   
  
 0.555
ATPAF1
ATP synthase mitochondrial F1 complex assembly factor 1.
      
 0.536
ECM1
Extracellular matrix protein 1.
      
 0.528
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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