STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NUCB1Nucleobindin 1. (454 aa)    
Predicted Functional Partners:
FAM20C
FAM20C golgi associated secretory pathway kinase.
    
 0.636
LTF
Lactotransferrin; Belongs to the transferrin family.
      
 0.621
GPRIN1
G protein regulated inducer of neurite outgrowth 1.
    
 
 0.620
ATL2
Atlastin GTPase 2.
      
 0.597
SURF4
Surfeit 4.
   
  
 0.573
RCN1
Uncharacterized protein.
   
 
 0.557
CALU
Calumenin.
   
 
 0.557
GC
GC vitamin D binding protein.
      
 0.554
GOLGB1
Golgin B1.
    
 
 0.546
PPP2R5D
Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit; The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment.
      
 0.519
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.