STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LRRC41Leucine rich repeat containing 41. (620 aa)    
Predicted Functional Partners:
RHOBTB3
Rho related BTB domain containing 3.
    
 0.699
CUL5
Cullin-5; Belongs to the cullin family.
    
 0.638
RNF7
Ring finger protein 7.
    
 0.618
RBX1
Ring-box 1.
    
 0.541
ARMT1
Acidic residue methyltransferase 1.
      
 0.525
RHOBTB2
Rho related BTB domain containing 2.
    
 0.499
ASB2
Ankyrin repeat and SOCS box containing 2.
     
 0.487
ZNF318
Zinc finger protein 318.
      
 0.455
ZC3H15
Zinc finger CCCH-type containing 15.
      
 0.452
CUL2
Cullin 2; Belongs to the cullin family.
     
 0.432
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.