Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DCLRE1B | NR2C2 | ENSFCAP00000031751 | ENSFCAP00000003265 | DNA cross-link repair 1B. | Nuclear receptor subfamily 2 group C member 2. | 0.569 |
DCLRE1B | ZNF827 | ENSFCAP00000031751 | ENSFCAP00000003813 | DNA cross-link repair 1B. | Zinc finger protein 827. | 0.703 |
GSX1 | NR2C2 | ENSFCAP00000022780 | ENSFCAP00000003265 | GS homeobox 1. | Nuclear receptor subfamily 2 group C member 2. | 0.590 |
JAZF1 | NR2C2 | ENSFCAP00000051838 | ENSFCAP00000003265 | JAZF zinc finger 1. | Nuclear receptor subfamily 2 group C member 2. | 0.871 |
MED1 | NCOR1 | ENSFCAP00000044432 | ENSFCAP00000033436 | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Nuclear receptor corepressor 1. | 0.542 |
MED1 | NCOR2 | ENSFCAP00000044432 | ENSFCAP00000024270 | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Nuclear receptor corepressor 2. | 0.581 |
MED1 | NR2C2 | ENSFCAP00000044432 | ENSFCAP00000003265 | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Nuclear receptor subfamily 2 group C member 2. | 0.573 |
NCOR1 | MED1 | ENSFCAP00000033436 | ENSFCAP00000044432 | Nuclear receptor corepressor 1. | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.542 |
NCOR1 | NCOR2 | ENSFCAP00000033436 | ENSFCAP00000024270 | Nuclear receptor corepressor 1. | Nuclear receptor corepressor 2. | 0.937 |
NCOR1 | NR2C2 | ENSFCAP00000033436 | ENSFCAP00000003265 | Nuclear receptor corepressor 1. | Nuclear receptor subfamily 2 group C member 2. | 0.638 |
NCOR2 | MED1 | ENSFCAP00000024270 | ENSFCAP00000044432 | Nuclear receptor corepressor 2. | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.581 |
NCOR2 | NCOR1 | ENSFCAP00000024270 | ENSFCAP00000033436 | Nuclear receptor corepressor 2. | Nuclear receptor corepressor 1. | 0.937 |
NCOR2 | NR2C2 | ENSFCAP00000024270 | ENSFCAP00000003265 | Nuclear receptor corepressor 2. | Nuclear receptor subfamily 2 group C member 2. | 0.643 |
NR2C2 | DCLRE1B | ENSFCAP00000003265 | ENSFCAP00000031751 | Nuclear receptor subfamily 2 group C member 2. | DNA cross-link repair 1B. | 0.569 |
NR2C2 | GSX1 | ENSFCAP00000003265 | ENSFCAP00000022780 | Nuclear receptor subfamily 2 group C member 2. | GS homeobox 1. | 0.590 |
NR2C2 | JAZF1 | ENSFCAP00000003265 | ENSFCAP00000051838 | Nuclear receptor subfamily 2 group C member 2. | JAZF zinc finger 1. | 0.871 |
NR2C2 | MED1 | ENSFCAP00000003265 | ENSFCAP00000044432 | Nuclear receptor subfamily 2 group C member 2. | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.573 |
NR2C2 | NCOR1 | ENSFCAP00000003265 | ENSFCAP00000033436 | Nuclear receptor subfamily 2 group C member 2. | Nuclear receptor corepressor 1. | 0.638 |
NR2C2 | NCOR2 | ENSFCAP00000003265 | ENSFCAP00000024270 | Nuclear receptor subfamily 2 group C member 2. | Nuclear receptor corepressor 2. | 0.643 |
NR2C2 | OSR2 | ENSFCAP00000003265 | ENSFCAP00000041794 | Nuclear receptor subfamily 2 group C member 2. | Odd-skipped related transciption factor 2. | 0.606 |
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