STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFAP1L1Actin filament associated protein 1 like 1. (777 aa)    
Predicted Functional Partners:
VPS53
VPS53 subunit of GARP complex.
      
 0.862
SYT10
Synaptotagmin 10.
      
 0.861
TDRD5
Tudor domain containing 5.
      
 0.838
RPH3AL
Rabphilin 3A like (without C2 domains).
      
 0.811
GEMIN4
Gem nuclear organelle associated protein 4.
      
 0.750
CNTN6
Contactin 6.
      
 0.714
PCYOX1L
Prenylcysteine oxidase 1 like.
      
 0.650
CLINT1
Clathrin interactor 1.
   
  
 0.558
ABLIM3
Actin binding LIM protein family member 3.
 
 
  
 0.528
FKBP2
Peptidylprolyl isomerase.
      
 0.416
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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