STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCDHAC2Protocadherin alpha subfamily C, 2. (1005 aa)    
Predicted Functional Partners:
ITPRID1
ITPR interacting domain containing 1.
      
 0.682
ITPKC
Kinase; Belongs to the inositol phosphokinase (IPK) family.
   
  
 0.679
PPFIA4
PTPRF interacting protein alpha 4.
    
 
 0.612
AZIN1
Antizyme inhibitor 1; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
     
 0.605
ZMAT4
Zinc finger matrin-type 4.
      
 0.546
TAAR2
Trace amine associated receptor 2 (gene/pseudogene); Belongs to the G-protein coupled receptor 1 family.
   
  
 0.543
KRBA2
KRAB-A domain containing 2.
      
 0.524
CYSTM1
Cysteine rich transmembrane module containing 1.
    
 0.514
KLK11
Kallikrein related peptidase 11; Belongs to the peptidase S1 family.
   
 
 0.468
TAAR9
Trace amine associated receptor 9 (gene/pseudogene); Belongs to the G-protein coupled receptor 1 family.
   
  
 0.464
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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