Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
FAM20A | STKLD1 | ENSFCAP00000010218 | ENSFCAP00000003470 | FAM20A golgi associated secretory pathway pseudokinase. | Serine/threonine kinase like domain containing 1. | 0.486 |
NEK6 | NEK7 | ENSFCAP00000047461 | ENSFCAP00000040569 | NIMA related kinase 6. | NIMA related kinase 7; Belongs to the protein kinase superfamily. | 0.522 |
NEK6 | STKLD1 | ENSFCAP00000047461 | ENSFCAP00000003470 | NIMA related kinase 6. | Serine/threonine kinase like domain containing 1. | 0.406 |
NEK7 | NEK6 | ENSFCAP00000040569 | ENSFCAP00000047461 | NIMA related kinase 7; Belongs to the protein kinase superfamily. | NIMA related kinase 6. | 0.522 |
NEK7 | STKLD1 | ENSFCAP00000040569 | ENSFCAP00000003470 | NIMA related kinase 7; Belongs to the protein kinase superfamily. | Serine/threonine kinase like domain containing 1. | 0.406 |
NME8 | SBK2 | ENSFCAP00000011766 | ENSFCAP00000015529 | NME/NM23 family member 8. | SH3 domain binding kinase family member 2; Belongs to the protein kinase superfamily. | 0.542 |
NME8 | STKLD1 | ENSFCAP00000011766 | ENSFCAP00000003470 | NME/NM23 family member 8. | Serine/threonine kinase like domain containing 1. | 0.507 |
PAN3 | STKLD1 | ENSFCAP00000039857 | ENSFCAP00000003470 | PAN2-PAN3 deadenylation complex subunit PAN3; Regulatory subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA deca [...] | Serine/threonine kinase like domain containing 1. | 0.400 |
SBK2 | NME8 | ENSFCAP00000015529 | ENSFCAP00000011766 | SH3 domain binding kinase family member 2; Belongs to the protein kinase superfamily. | NME/NM23 family member 8. | 0.542 |
SBK2 | STKLD1 | ENSFCAP00000015529 | ENSFCAP00000003470 | SH3 domain binding kinase family member 2; Belongs to the protein kinase superfamily. | Serine/threonine kinase like domain containing 1. | 0.606 |
STKLD1 | FAM20A | ENSFCAP00000003470 | ENSFCAP00000010218 | Serine/threonine kinase like domain containing 1. | FAM20A golgi associated secretory pathway pseudokinase. | 0.486 |
STKLD1 | NEK6 | ENSFCAP00000003470 | ENSFCAP00000047461 | Serine/threonine kinase like domain containing 1. | NIMA related kinase 6. | 0.406 |
STKLD1 | NEK7 | ENSFCAP00000003470 | ENSFCAP00000040569 | Serine/threonine kinase like domain containing 1. | NIMA related kinase 7; Belongs to the protein kinase superfamily. | 0.406 |
STKLD1 | NME8 | ENSFCAP00000003470 | ENSFCAP00000011766 | Serine/threonine kinase like domain containing 1. | NME/NM23 family member 8. | 0.507 |
STKLD1 | PAN3 | ENSFCAP00000003470 | ENSFCAP00000039857 | Serine/threonine kinase like domain containing 1. | PAN2-PAN3 deadenylation complex subunit PAN3; Regulatory subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA deca [...] | 0.400 |
STKLD1 | SBK2 | ENSFCAP00000003470 | ENSFCAP00000015529 | Serine/threonine kinase like domain containing 1. | SH3 domain binding kinase family member 2; Belongs to the protein kinase superfamily. | 0.606 |