STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M3W104_FELCAHistone domain-containing protein; Belongs to the histone H2B family. (88 aa)    
Predicted Functional Partners:
H3F3A
Histone H3; Belongs to the histone H3 family.
   
 0.713
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.705
CENPA
Centromere protein A.
   
 0.688
PLK1
Serine/threonine-protein kinase PLK.
   
 
 0.659
MACROH2A1
Core histone macro-H2A; Variant histone H2A which replaces conventional H2A in a subset of nucleosomes.
   
 0.623
LOC105260541
Histone H3; Belongs to the histone H3 family.
   
 0.621
ENSFCAP00000043372
Histone H3; Belongs to the histone H3 family.
   
 0.621
LOC101093269
Histone H3.1.
   
 0.621
LOC105260541-2
Histone H3.1.
   
 0.621
LOC101080886
Histone H3.1.
   
 0.621
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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