STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHD7Chromodomain helicase DNA binding protein 7. (2995 aa)    
Predicted Functional Partners:
CPA6
Carboxypeptidase A6.
    
 
 0.708
MAGOH
Mago homolog, exon junction complex subunit.
      
 0.663
GDF6
TGF_BETA_2 domain-containing protein.
   
 
 0.663
BAZ1B
Bromodomain adjacent to zinc finger domain 1B.
   
 0.662
PHACTR4
Phosphatase and actin regulator.
      
 0.651
SALL1
Spalt like transcription factor 1.
   
 0.645
SUPT4H1
SPT4 homolog, DSIF elongation factor subunit.
   
 
 0.644
SSRP1
Tankyrase 1 binding protein 1.
   
 
 0.619
TRRAP
Transformation/transcription domain associated protein; Belongs to the PI3/PI4-kinase family.
   
 0.604
NKAIN3
Sodium/potassium transporting ATPase interacting 3.
      
 0.596
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.