STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF25Ring finger protein 25. (457 aa)    
Predicted Functional Partners:
LSM7
LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated.
      
 0.711
RNF11
Ring finger protein 11.
      
 0.696
MINK1
Misshapen like kinase 1.
      
 0.660
PSME1
Proteasome activator subunit 1.
      
 0.656
ABI2
Abl interactor 2.
      
 0.637
PSMB4
Proteasome subunit beta; Belongs to the peptidase T1B family.
      
 0.632
PSMA6
Proteasome subunit alpha type.
      
 0.605
ENSFCAP00000036869
Proteasome subunit alpha type.
      
 0.605
SNAPIN
SNAP associated protein.
      
 0.603
GIT2
GIT ArfGAP 2.
      
 0.601
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.