STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101085685Uncharacterized protein. (503 aa)    
Predicted Functional Partners:
WRN
WRN RecQ like helicase.
  
 0.946
ERCC6
ERCC excision repair 6, chromatin remodeling factor.
   
 0.909
LOC101085685-2
XPGI domain-containing protein.
 
      0.899
ENSFCAP00000055026
XPGN domain-containing protein.
 
      0.897
EP300
E1A binding protein p300.
   
 0.891
ERCC2
ERCC excision repair 2, TFIIH core complex helicase subunit.
   
 0.872
ERCC3
ERCC excision repair 3, TFIIH core complex helicase subunit.
    
 0.869
GTF2H1
General transcription factor IIH subunit 1.
    
 0.855
XPA
XPA, DNA damage recognition and repair factor.
    
 0.846
PCNA
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
  
 0.832
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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