STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NXNL2Sphingosine-1-phosphate receptor 3; Belongs to the G-protein coupled receptor 1 family. (623 aa)    
Predicted Functional Partners:
GNAI2
G protein subunit alpha i2.
    
 0.950
GNAI1
G protein subunit alpha i1.
    
 0.950
GNAI3
G protein subunit alpha i3.
    
 0.950
GNA12
G protein subunit alpha 12.
    
 0.946
GNA13
G protein subunit alpha 13.
    
 0.945
GNAQ
G protein subunit alpha q.
    
 0.929
SPHK2
DAGKc domain-containing protein.
      
 0.659
SPHK1
Sphingosine kinase 1.
      
 0.633
APOM
Apolipoprotein M.
      
 0.569
ESR1
Estrogen receptor; Nuclear hormone receptor. The steroid hormones and their receptors are involved in the regulation of eukaryotic gene expression and affect cellular proliferation and differentiation in target tissues. Ligand-dependent nuclear transactivation involves either direct homodimer binding to a palindromic estrogen response element (ERE) sequence or association with other DNA-binding transcription factors, such as AP-1/c-Jun, c-Fos, ATF-2, Sp1 and Sp3, to mediate ERE- independent signaling. Ligand binding induces a conformational change allowing subsequent or combinatorial a [...]
     
 0.517
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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