STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFCAB14EF-hand calcium binding domain 14. (627 aa)    
Predicted Functional Partners:
CACUL1
CDK2 associated cullin domain 1; Belongs to the cullin family.
      
 0.670
NSUN4
NOP2/Sun RNA methyltransferase 4; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
      
 0.664
UNC80
Unc-80 homolog, NALCN channel complex subunit.
      
 0.646
RBM26
RNA binding motif protein 26.
      
 0.628
DMBX1
Diencephalon/mesencephalon homeobox 1.
      
 0.626
TXNDC11
Thioredoxin domain containing 11.
      
 0.540
TM2D1
TM2 domain containing 1.
      
 0.540
RCHY1
Ring finger and CHY zinc finger domain containing 1.
      
 0.453
SLC19A2
High affinity thiamine transport protein 1.
      
 0.442
SNX29
Sorting nexin 29.
      
 0.418
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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