STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BUD23BUD23 rRNA methyltransferase and ribosome maturation factor. (281 aa)    
Predicted Functional Partners:
TSR1
TSR1 ribosome maturation factor.
   
 0.972
BYSL
Bystin like.
   
 0.971
LTV1
LTV1 ribosome biogenesis factor.
   
 0.966
DIMT1
rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.
   
 
 0.943
NOB1
RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family.
   
 0.934
RPS9
Ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family.
   
  0.924
RPS8
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
    
  0.923
ENSFCAP00000037779
Uncharacterized protein.
   
  0.912
TRMT112
tRNA methyltransferase subunit 11-2.
   
 0.873
ENSFCAP00000056761
Uncharacterized protein.
   
 0.873
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.