STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNX25Sorting nexin 25. (997 aa)    
Predicted Functional Partners:
ANKRD10
Ankyrin repeat domain 10.
    
 
 0.755
CDKL3
Cyclin dependent kinase like 3.
      
 0.673
PMS1
PMS1 homolog 1, mismatch repair system component.
   
  
 0.662
CEP19
Centrosomal protein 19.
      
 0.644
M3X1V3_FELCA
Ig-like domain-containing protein.
      
 0.642
LOC105260178
Ig-like domain-containing protein.
      
 0.642
LRRC40
Leucine rich repeat containing 40.
   
 
 0.641
BEND7
BEN domain-containing protein.
      
 0.625
NABP2
Nucleic acid binding protein 2.
      
 0.624
RAB9B
RAB9B, member RAS oncogene family.
    
 0.616
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.