STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC9Coiled-coil domain containing 9. (606 aa)    
Predicted Functional Partners:
PPP1R35
Protein phosphatase 1 regulatory subunit 35.
      
 0.655
CHMP2A
Charged multivesicular body protein 2A.
      
 0.627
EIF4A3
Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family.
   
 0.571
BIRC6
Baculoviral IAP repeat containing 6.
   
 0.468
MAGOH
Mago homolog, exon junction complex subunit.
   
  0.457
WDR18
WD repeat domain 18.
   
 0.452
KLRAP1
Uncharacterized protein.
    
  0.412
RBM8A
RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.
    
  0.412
TEX10
Testis expressed 10.
   
 0.408
THRA
Thyroid hormone receptor alpha.
    
  0.402
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.