STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRA2ATransformer 2 alpha homolog. (281 aa)    
Predicted Functional Partners:
SRSF1
Uncharacterized protein.
   
 0.891
SRSF3
RRM domain-containing protein.
   
 0.858
M3X8I2_FELCA
RRM domain-containing protein.
   
 0.858
SRSF2
RRM domain-containing protein.
  
0.819
SRSF10
Serine and arginine rich splicing factor 10.
   
0.807
SRSF9
Serine and arginine rich splicing factor 9.
   
 0.798
SRSF4
Serine and arginine rich splicing factor 4.
   
 0.797
SRSF7
Serine and arginine rich splicing factor 7.
   
 0.770
ENSFCAP00000030387
RRM domain-containing protein.
   
 0.770
SRSF11
Serine and arginine rich splicing factor 11.
   
 0.755
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.