STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RRHRetinal pigment epithelium-derived rhodopsin homolog; Belongs to the G-protein coupled receptor 1 family. (337 aa)    
Predicted Functional Partners:
RD3L
Retinal degeneration 3 like.
      
 0.771
GPR139
G protein-coupled receptor 139.
      
 0.756
LRIT3
Leucine rich repeat, Ig-like and transmembrane domains 3.
 
 
 0.747
ERMAP
Erythroblast membrane associated protein.
      
 0.733
DEXI
Dexi homolog.
      
 0.726
MAP6D1
MAP6 domain containing 1.
    
 0.720
GNAT1
G protein subunit alpha transducin 1.
   
 0.671
RFXAP
Regulatory factor X associated protein.
      
 0.660
GNAT2
G protein subunit alpha transducin 2.
   
 0.644
GNGT2
Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.
   
 0.627
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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