STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC10A4Solute carrier family 10 member 4. (439 aa)    
Predicted Functional Partners:
SLC44A5
Solute carrier family 44 member 5; Belongs to the CTL (choline transporter-like) family.
   
  
 0.629
APOC4
Uncharacterized protein.
   
  
 0.619
PTCHD1
Patched domain containing 1.
      
 0.617
NYAP2
Neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2.
   
  
 0.590
PLA2R1
Phospholipase A2 receptor 1.
   
  
 0.548
NIPAL1
NIPA like domain containing 1.
      
 0.541
SLC18B1
Solute carrier family 18 member B1.
      
 0.528
SLAIN2
SLAIN motif family member 2.
 
    
 0.516
FRYL
FRY like transcription coactivator.
      
 0.515
MEX3B
Mex-3 RNA binding family member B.
      
 0.512
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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