STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCNM1Sodium channel modifier 1. (230 aa)    
Predicted Functional Partners:
ARMC7
Armadillo repeat containing 7.
    
 
 0.817
RNF212
RING-type domain-containing protein.
      
 0.808
SF3B3
Splicing factor 3b subunit 3.
    
   0.802
SF3B1
Splicing factor 3b subunit 1.
    
 
 0.797
CDC5L
Cell division cycle 5 like.
    
   0.701
SF3B2
Splicing factor 3b subunit 2.
    
   0.701
PRPF8
Pre-mRNA processing factor 8.
    
   0.701
SF3B6
Splicing factor 3b subunit 6.
    
   0.670
ARHGEF10L
Rho guanine nucleotide exchange factor 10 like.
      
 0.628
NID1
Nidogen 1.
      
 0.596
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.