STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PDLIM2PDZ and LIM domain 2. (418 aa)    
Predicted Functional Partners:
PTPN1
Tyrosine-protein phosphatase non-receptor type.
    
 0.771
CHD1
Chromodomain helicase DNA binding protein 1.
      
 0.668
CDC73
Cell division cycle 73.
      
 0.644
EHBP1
EH domain binding protein 1.
   
 0.636
SORBS3
Sorbin and SH3 domain containing 3.
 
  
 0.621
PDLIM5
PDZ and LIM domain 5.
     
0.614
WDR5
WD repeat domain 5.
    
 0.605
FBL
Fibrillarin.
      
 0.604
PDLIM4
PDZ and LIM domain 4.
     
0.604
PDLIM7
PDZ and LIM domain 7.
     
0.595
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.