STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PDLIM2PDZ and LIM domain 2. (418 aa)    
Predicted Functional Partners:
PDLIM4
PDZ and LIM domain 4.
     
 0.901
PDLIM1
PDZ and LIM domain 1.
     
 0.862
PDLIM3
PDZ and LIM domain 3.
     
 0.808
CHD1
Chromodomain helicase DNA binding protein 1.
      
 0.751
PTPN1
Tyrosine-protein phosphatase non-receptor type.
    
 0.736
CDC73
Cell division cycle 73.
      
 0.709
WDR5
WD repeat domain 5.
    
 
 0.652
SORBS3
Sorbin and SH3 domain containing 3.
 
 
 0.650
MKRN2
Makorin ring finger protein 2.
    
 
 0.643
FBL
Fibrillarin.
      
 0.613
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.