STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBM27Uncharacterized protein. (1059 aa)    
Predicted Functional Partners:
ZFC3H1
Zinc finger C3H1-type containing.
   
 
 0.678
TRIM33
Tripartite motif containing 33.
   
    0.673
POM121C
Uncharacterized protein.
   
  
 0.648
PRR14L
Proline rich 14 like.
    
 
 0.641
TRAPPC10
Uncharacterized protein.
      
 0.637
RC3H2
Ring finger and CCCH-type domains 2.
   
 
 0.595
GOPC
PDZ domain-containing protein.
   
 
 0.550
PABPN1
Poly(A) binding protein nuclear 1.
    
 
 0.546
CLUH
Clustered mitochondria protein homolog; mRNA-binding protein involved in proper cytoplasmic distribution of mitochondria. Specifically binds mRNAs of nuclear- encoded mitochondrial proteins in the cytoplasm and regulates transport or translation of these transcripts close to mitochondria, playing a role in mitochondrial biogenesis; Belongs to the CLU family.
   
  
 0.546
DELE1
DAP3 binding cell death enhancer 1.
      
 0.540
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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