STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PLOD3Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3. (740 aa)    
Predicted Functional Partners:
PLOD1
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1.
  
0.968
PLOD2
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2.
  
 
 
0.956
COLGALT1
Collagen beta(1-O)galactosyltransferase 1.
   
0.955
COLGALT2
Collagen beta(1-O)galactosyltransferase 2.
   
0.955
CAMKMT
Calmodulin-lysine N-methyltransferase.
     
  0.900
EHMT2
Euchromatic histone lysine methyltransferase 2.
    
  0.736
EHMT1
Euchromatic histone lysine methyltransferase 1.
    
 0.696
NSD1
Nuclear receptor binding SET domain protein 1.
    
 0.688
SMYD3
SET and MYND domain containing 3.
   
 0.688
SMYD2
SET domain-containing protein.
   
 0.683
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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