STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNFT1Ring finger protein, transmembrane 1. (435 aa)    
Predicted Functional Partners:
LAPTM4A-2
Uncharacterized protein.
      
 0.564
CGRRF1
Cell growth regulator with ring finger domain 1.
      
 0.554
THAP1
Ring finger protein 170.
      
 0.551
RAPGEFL1
Rap guanine nucleotide exchange factor like 1.
      
 0.530
FAM118A
Family with sequence similarity 118 member A.
      
 0.526
ACOT9
Acyl-CoA thioesterase 9.
      
 0.517
ATP8B2
Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.
      
 0.495
RNF5
Ring finger protein 5.
      
 0.455
RNF13
Ring finger protein 13.
      
 0.455
ARID5A
AT-rich interaction domain 5A.
      
 0.455
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.