STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TIGD7Tigger transposable element derived 7. (548 aa)    
Predicted Functional Partners:
POGK
Pogo transposable element derived with KRAB domain.
      
 0.755
LOC101088560
Uncharacterized protein.
   
 
 0.683
NAIF1
Nuclear apoptosis inducing factor 1.
   
  
 0.648
STARD7
StAR related lipid transfer domain containing 7.
      
 0.605
CIAO3
Cytosolic iron-sulfur assembly component 3; Belongs to the NARF family.
      
 0.547
RAB11FIP3
RAB11 family interacting protein 3.
      
 0.546
THAP9
THAP domain containing 9.
    
 
 0.527
GLIS2
GLIS family zinc finger 2.
    
 
 0.526
GNPTG
N-acetylglucosamine-1-phosphate transferase subunit gamma.
      
 0.522
PGBD5
PiggyBac transposable element derived 5.
      
 0.455
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.