STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBP1Upstream binding protein 1. (539 aa)    
Predicted Functional Partners:
BZW1
Basic leucine zipper and W2 domains 1.
      
 0.702
CLASP2
Cytoplasmic linker associated protein 2.
      
 0.656
FBXL2
F-box and leucine rich repeat protein 2.
      
 0.632
ERP29
Endoplasmic reticulum protein 29.
      
 0.553
ARFGEF1
ADP ribosylation factor guanine nucleotide exchange factor 1.
      
 0.531
POFUT1
Protein O-fucosyltransferase 1.
   
  
 0.528
RBP5
Retinol binding protein 5; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.
     
 0.513
TRIP12
Thyroid hormone receptor interactor 12.
   
  
 0.508
EIF4H
Eukaryotic translation initiation factor 4H.
   
 0.505
NSD1
Nuclear receptor binding SET domain protein 1.
   
 0.502
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.