STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BSXBrain specific homeobox. (232 aa)    
Predicted Functional Partners:
PMCH
Pro-melanin concentrating hormone.
      
 0.755
FEZF1
FEZ family zinc finger 1.
   
 0.693
DMRTA1
DMRT like family A1.
   
  
 0.680
LRP4
LDL receptor related protein 4.
      
 0.655
SIM1
SIM bHLH transcription factor 1.
      
 0.612
ATP6V1B1
Vacuolar proton pump subunit B; Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase; Belongs to the ATPase alpha/beta chains family.
      
 0.595
GRIA2
Glutamate ionotropic receptor AMPA type subunit 2.
      
 0.512
GRIN1
Glutamate ionotropic receptor NMDA type subunit 1.
      
 0.509
LEF1
Lymphoid enhancer binding factor 1.
    
 0.488
CHRM4
Muscarinic acetylcholine receptor; The muscarinic acetylcholine receptor mediates various cellular responses, including inhibition of adenylate cyclase, breakdown of phosphoinositides and modulation of potassium channels through the action of G proteins.
      
 0.485
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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