STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRDM11PR/SET domain 11. (1177 aa)    
Predicted Functional Partners:
CBX8
Chromobox 8.
    
 
 0.640
MCTP2
Multiple C2 and transmembrane domain containing 2.
      
 0.638
ARL15
ADP ribosylation factor like GTPase 15.
     
 0.631
RWDD2A
RWD domain-containing protein.
      
 0.619
KIAA1755
KIAA1755.
      
 0.590
B4GALT6
Beta-1,4-galactosyltransferase 6.
      
 0.550
RNF103
Ring finger protein 103.
   
  
 0.547
ZBTB47
Zinc finger and BTB domain containing 47.
    
 
 0.509
SORCS1
Sortilin related VPS10 domain containing receptor 1.
      
 0.509
ZBTB47-2
BTB domain-containing protein.
    
 
 0.509
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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