STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111556168Uncharacterized protein. (479 aa)    
Predicted Functional Partners:
HSD17B8
Hydroxysteroid 17-beta dehydrogenase 8; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
  
 0.690
SEC61A2
SEC61 translocon alpha 2 subunit.
   
  
 0.596
SEC61A1
SEC61 translocon alpha 1 subunit.
   
  
 0.596
SLC39A3
Solute carrier family 39 member 3.
   
 0.583
SLC30A6
Solute carrier family 30 member 6.
  
 0.571
SLC30A9
Solute carrier family 30 member 9.
  
  
 0.543
SLC30A5
Solute carrier family 30 member 5.
  
 0.529
SLC39A2
Solute carrier family 39 member 2.
   
 0.519
STUB1
STIP1 homology and U-box containing protein 1.
 
 
    0.518
SLC39A9
Solute carrier family 39 member 9.
    
 
0.509
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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